BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C09SP1|AL429040
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1145 1717 0.0
>3x_Contig1145
Length = 5226
Score = 1717 bits (866), Expect = 0.0
Identities = 901/906 (99%), Gaps = 5/906 (0%)
Strand = Plus / Plus
Query: 1 atccttaagaaaa-ttgttgagaaaatggtcctggagggaaaaca-tatccaaactaaat 58
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3265 atccttaagaaaaattgttgagaaaatggtcctggagggaaaacactatccaaactaaat 3324
Query: 59 aaggaattggtctttttgaatatattatattccctggtagggacaggatttagcaaatta 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3325 aaggaattggtctttttgaatatattatattccctggtagggacaggatttagcaaatta 3384
Query: 119 accggtgcaatactatatcatcagttcaatgttgacaaattcactaatgtgattctgtac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3385 accggtgcaatactatatcatcagttcaatgttgacaaattcactaatgtgattctgtac 3444
Query: 179 aa-cacattaaagttctgcagtaaagtttgtgaactcttcgtaaagctaccaattgagaa 237
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3445 aaacacattaaagttctgcagtaaagtttgtgaactcttcgtaaagctaccaattgagaa 3504
Query: 238 tctattgagaaggagtcaagtgaagttcttgttcacagaaaacccattccaagtacaatc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3505 tctattgagaaggagtcaagtgaagttcttgttcacagaaaacccattccaagtacaatc 3564
Query: 298 tgaaatgttaatcataaaaccaagggagtaccaatccatctacctgacggtattcaagca 357
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3565 tgaaatgttaatcataaaaccaagggagtaccaatccatctac-tgacggtattcaagca 3623
Query: 358 gtgcgacagaattagtgaactatggcgaggctggagactcgggcttctaagcattttatg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3624 gtgcgacagaattagtgaactatggcgaggctggagactcgggcttctaagcattttatg 3683
Query: 418 cggttatggtttgaagattttaaataagccatcagaaatactcgaag-ggagaagtttta 476
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3684 cggttatggtttgaagattttaaataagccatcagaaatactcgaagaggagaagtttta 3743
Query: 477 gttcatgtagatatctataagtgaactggacattgaaggaaaacatacatatataaaata 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3744 gttcatgtagatatctataagtgaactggacattgaaggaaaacatacatatataaaata 3803
Query: 537 ataataataatacagatgtctttagtttaagaaagtcgtaaattcatatctacgatgaag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3804 ataataataatacagatgtctttagtttaagaaagtcgtaaattcatatctacgatgaag 3863
Query: 597 gcttctggttcatttcgcttgcatcaatcaagaactggcctaatactcgaagtggatcct 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3864 gcttctggttcatttcgcttgcatcaatcaagaactggcctaatactcgaagtggatcct 3923
Query: 657 cgggcttttctctggctatcagtttcattccttccaataaatgttttgttacatgttcat 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3924 cgggcttttctctggctatcagtttcattccttccaataaatgttttgttacatgttcat 3983
Query: 717 tcaaatatcttctagtggttgacccaccgatcatcgctactggatcaacacgatcatgat 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3984 tcaaatatcttctagtggttgacccaccgatcatcgctactggatcaacacgatcatgat 4043
Query: 777 caatttgtagttccttcttgggtgatacttctctttctgttgtagctgcagttgcagagg 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4044 caatttgtagttccttcttgggtgatacttctctttctgttgtagctgcagttgcagagg 4103
Query: 837 taacagttccagatgattcccttggtatacccgatggagacaggggttcagtggtagaaa 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4104 taacagttccagatgattcccttggtatacccgatggagacaggggttcagtggtagaaa 4163
Query: 897 tcgaag 902
||||||
Sbjct: 4164 tcgaag 4169
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8165
Number of Sequences: 1807
Number of extensions: 8165
Number of successful extensions: 237
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)